Portainer Python API Docs | dltHub

Build a Portainer-to-database pipeline in Python using dlt with AI Workbench support for Claude Code, Cursor, and Codex.

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Portainer is a container management platform that exposes a REST API for automating UI operations and interfacing with underlying Docker or Kubernetes environments. The REST API base URL is https://<portainer-url>:<port>/api and requests require either an X-API-Key header or a Bearer token in the Authorization header.

dlt is an open-source Python library that handles authentication, pagination, and schema evolution automatically. dlthub provides AI context files that enable code assistants to generate production-ready pipelines. Install with uv add "dlt[hub]" and start loading Portainer data in under 10 minutes.


What data can I load from Portainer?

Here are some of the endpoints you can load from Portainer:

ResourceEndpointMethodData selectorDescription
endpoints/api/endpointsGETList environments (endpoints) with pagination and filtering.
stacks/api/stacksGETList stacks accessible to the user.
users/api/usersGETList users (requires admin).
groups/api/endpoint_groupsGETList endpoint groups.
registries/api/registriesGETList registries.

How do I authenticate with the Portainer API?

Portainer supports two authentication methods: API access tokens passed via the X-API-Key header, or JWT tokens passed via the Authorization header using the Bearer scheme.

1. Get your credentials

To obtain a long-lived API Access Token for Portainer: 1. Log in to the Portainer dashboard via your web browser. 2. Click on your user avatar or username in the top-right corner of the interface. 3. Select 'My account' from the dropdown menu. 4. Scroll down to the 'Access tokens' section. 5. Click the 'Add access token' button. 6. Provide a descriptive name for the token in the 'Description' field and click 'Add access token' to generate it. 7. Copy the generated token immediately, as it will not be displayed again after you leave the page. For programmatic authentication (e.g., in CI/CD pipelines), use this token in the 'X-API-Key' request header.

2. Add them to .dlt/secrets.toml

[sources.portainer_source] portainer_url = "https://your-portainer-instance.com:9443" api_key = "ptr_your_generated_token_here"

dlt reads this automatically at runtime — never hardcode tokens in your pipeline script. For production environments, see setting up credentials with dlt for environment variable and vault-based options.


How do I set up and run the pipeline?

Set up a virtual environment and install dlt:

uv init uv add "dlt[hub]"

1. Install the dlt AI harness:

uv run dlthub ai init --agent <your-agent> # <agent>: claude | cursor | codex

This installs project rules, a secrets management skill, appropriate ignore files, and configures the dlt MCP server for your agent. Learn more →

2. Install the rest-api-pipeline toolkit:

uv run dlthub ai toolkit install rest-api-pipeline

This loads the skills and context about dlt the agent uses to build the pipeline iteratively, efficiently, and safely. The agent uses MCP tools to inspect credentials — it never needs to read your secrets.toml directly. Learn more →

3. Start LLM-assisted coding:

Use /find-source to load data from the Portainer API into DuckDB.

The rest-api-pipeline toolkit takes over from here — it reads relevant API documentation, presents you with options for which endpoints to load, and follows a structured workflow to scaffold, debug, and validate the pipeline step by step.

4. Run the pipeline:

uv run python portainer_pipeline.py

If everything is configured correctly, you'll see output like this:

Pipeline portainer_pipeline load step completed in 0.26 seconds 1 load package(s) were loaded to destination duckdb and into dataset portainer_data The duckdb destination used duckdb:/portainer.duckdb location to store data Load package 1749667187.541553 is LOADED and contains no failed jobs

Inspect your pipeline and data:

uv run dlthub show

This opens the Pipeline Dashboard where you can verify pipeline state, load metrics, schema (tables, columns, types), and query the loaded data directly.


Python pipeline example

This example loads /api/auth and /api/endpoints from the Portainer API into DuckDB. It mirrors the endpoint and data selector configuration from the table above:

import dlt from dlt.sources.rest_api import RESTAPIConfig, rest_api_resources @dlt.source def portainer_source(api_key=dlt.secrets.value): config: RESTAPIConfig = { "client": { "base_url": "https://<portainer-url>:<port>/api", "auth": {"type": "bearer", "token": api_key}, }, "resources": [ {"name": "endpoints", "endpoint": {"path": "api/endpoints"}}, {"name": "stacks", "endpoint": {"path": "api/stacks"}} ], } yield from rest_api_resources(config) def get_data() -> None: pipeline = dlt.pipeline( pipeline_name="portainer_pipeline", destination="duckdb", dataset_name="portainer_data", ) load_info = pipeline.run(portainer_source()) print(load_info)

To add more endpoints, append entries from the resource table to the "resources" list using the same name, path, and data_selector pattern.


How do I query the loaded data?

Once the pipeline runs, dlt creates one table per resource. You can query with Python or SQL.

Python (pandas DataFrame):

import dlt data = dlt.pipeline("portainer_pipeline").dataset() sessions_df = data.endpoints.df() print(sessions_df.head())

SQL (DuckDB example):

SELECT * FROM portainer_data.endpoints LIMIT 10;

In a marimo or Jupyter notebook:

import dlt data = dlt.pipeline("portainer_pipeline").dataset() data.endpoints.df().head()

See how to explore your data in marimo Notebooks and how to query your data in Python with dataset.


What destinations can I load Portainer data to?

dlt supports loading into any of these destinations — only the destination parameter changes:

DestinationExample value
DuckDB (local, default)"duckdb"
PostgreSQL"postgres"
BigQuery"bigquery"
Snowflake"snowflake"
Redshift"redshift"
Databricks"databricks"
Filesystem (S3, GCS, Azure)"filesystem"

Change the destination in dlt.pipeline(destination="snowflake") and add credentials in .dlt/secrets.toml. See the full destinations list.


Next steps

Continue your data engineering journey with the other toolkits of the dltHub AI harness:

  • data-exploration — Build custom notebooks, charts, and dashboards for deeper analysis with marimo notebooks.
  • dlthub-platform — Deploy, schedule, and monitor your pipeline in production.
uv run dlthub ai toolkit install data-exploration uv run dlthub ai toolkit install dlthub-platform

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